NaviNIBS.Navigator.Model.Session module

class NaviNIBS.Navigator.Model.Session.MNIRegistration

Bases: object

sigTransformChanged: NaviNIBS.util.Signaler.Signal

class NaviNIBS.Navigator.Model.Session.Session(filepath, subjectID=None, sessionID=None, miscSettings=NOTHING, MRI=NOTHING, headModel=NOTHING, coordinateSystems=NOTHING, subjectRegistration=NOTHING, targets=NOTHING, tools=None, samples=NOTHING, digitizedLocations=NOTHING, triggerSources=NOTHING, dockWidgetLayouts=NOTHING, addons=NOTHING, compressedFileIsDirty=True, lastAutosaveFilenamePrefix=None, unpackedSessionDir=None)

Bases: object

Primary data model for a NaviNIBS session. Contains all session-specific data and methods for saving/loading.

Parameters:

• _filepath

• _subjectID

• _sessionID

• _miscSettings

• _MRI

• _headModel

• _coordinateSystems

• _subjectRegistration

• _targets

• _tools

• _samples

• _digitizedLocations

• _triggerSources

• _dockWidgetLayouts

• _addons

• _compressedFileIsDirty

• _lastAutosaveFilenamePrefix

• _unpackedSessionDir

_filepath: str

_subjectID: typing.Optional[str]

_sessionID: typing.Optional[str]

_miscSettings: NaviNIBS.Navigator.Model.MiscSettings.MiscSettings

_MRI: NaviNIBS.Navigator.Model.MRI.MRI

_headModel: NaviNIBS.Navigator.Model.HeadModel.HeadModel

_coordinateSystems: NaviNIBS.Navigator.Model.CoordinateSystems.CoordinateSystems

_subjectRegistration: NaviNIBS.Navigator.Model.SubjectRegistration.SubjectRegistration

_targets: NaviNIBS.Navigator.Model.Targets.Targets

_tools: NaviNIBS.Navigator.Model.Tools.Tools

_samples: NaviNIBS.Navigator.Model.Samples.Samples

_digitizedLocations: NaviNIBS.Navigator.Model.DigitizedLocations.DigitizedLocations

_triggerSources: NaviNIBS.Navigator.Model.Triggering.TriggerSources

_dockWidgetLayouts: NaviNIBS.Navigator.Model.DockWidgetLayouts.DockWidgetLayouts

_addons: NaviNIBS.Navigator.Model.Addons.Addons

sigInfoChanged: NaviNIBS.util.Signaler.Signal

Includes list of keys in info that were changed. If list is None, subscribers should assume that all info changed.

sigDirtyKeysChanged: NaviNIBS.util.Signaler.Signal

property subjectID

property sessionID

property filepath

property miscSettings

property MRI

property headModel

property coordinateSystems

property digitizedLocations

property subjectRegistration

property targets

property samples

property tools

property triggerSources

property dockWidgetLayouts

property addons

property compressedFileIsDirty

property unpackedSessionDir

property beautifier

Cached instance of json beautifier. This saves some time compared to initializing with each dumps call.

flagKeyAsDirty(key)

property dirtyKeys

Result should not be modified.

saveToUnpackedDir(saveDirtyOnly=True, asAutosave=False)

saveToFile(updateDirtyOnly=True)

mergeFromFile(filepath, sections=None)

Import session elements from another file. Specify sections to only read a subset of elements from the file to merge, e.g. sections=[‘targets’] to ignore everything but the targets section in the loaded file.

classmethod createNew(filepath, unpackedSessionDir=None)

classmethod loadFromFile(filepath, unpackedSessionDir=None)

classmethod loadFromFolder(folderpath, **kwargs)

classmethod loadFromUnpackedDir(unpackedSessionDir, filepath=None, **kwargs)

classmethod getTempUnpackDir()